GSE36040   Details

GSE Accession GSE36040
Title Diurnal and circadian gene expression profile of leaf throughout the entire growth of rice in the field
Submission Date 2/23/12
Last Update Date 12/6/12
Pubmed ID 23180765
Experiment Type Expression profiling by array
Contributor Yutaka,,Sato; Baltazar Antonio; Nobukazu Namiki; Yoshiaki Nagamura
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Country
Organism Oryza sativa; Oryza sativa Japonica Group
Organism ID 4530; 39947
Organism Synonym red rice; rice; Japanese rice; Japonica rice; Oryza sativa (japonica cultivar-group); Oryza sativa subsp. japonica
Summary A continuous gene expression profiling of leaves was performed at regular interval during a 48-hr period in 9 different growth stages from transplanting until harvesting to characterize the diurnal and circadian gene expression profile of rice and to understand the transcriptional program and physiological state throughout entire the growth under natural field conditions.
Overall Design The uppermost fully expanded leaf in the main stem was collected at 2-hr intervals during a 48-hr period at 9 different growth stages encompassing the vegetative, reproductive and ripening stages. All samples were obtained from rice plants grown in the field during the 2008 cultivation season.
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Timepoint Count 27
Timepoints gsm: [15dat_, 16dat_, 17dat_, 29dat_, 30dat_, 31dat_, 43dat_, 44dat_, 45dat_, 57dat_, 58dat_, 59dat_, 78dat_, 79dat_, 80dat_, 85dat_, 86dat_, 87dat_, 92dat_, 93dat_, 94dat_, 99dat_, 100dat_, 101dat_, 113dat_, 114dat_, 115dat_]
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