GSE80474   Details

GSE Accession GSE80474
Title Investigating Conservation of the Cell-Cycle-Regulated Transcriptional Program in the Fungal Pathogen, Cryptococcus neoformans
Submission Date 2016-04-20
Last Update Date 2016-12-07
Pubmed ID 27918582
Experiment Type Expression profiling by high throughput sequencing
Contributor Christina,M,Kelliher; Adam,R,Leman; Crystal,S,Sierra; Steven,B,Haase
Contact Name Steven Haase
Contact E-mail shaase@duke.edu
Organization Name Duke University
Country USA
Organism Cryptococcus neoformans var. grubii;Saccharomyces cerevisiae
Organism ID
Organism Synonym S. cerevisiae;brewer's yeast;baker's yeast
Summary Cell-cycle transcript dynamics from two species of wild-type budding yeast growing at 30 degrees Celsius in rich media: Saccharomyces cerevisiae (BF264-15D background) and Cryptococcus neoformans var. grubii (H99F background). We compared programs of cell-cycle-regulated genes between distantly related budding yeasts.
Overall Design One time course experiment for each yeast over multiple cell cycles
Platform ID
Timepoint Count 50
Timepoints gsm: [0min, 5min, 10min, 15min, 20min, 25min, 30min, 35min, 40min, 45min, 50min, 55min, 60min, 65min, 70min, 75min, 80min, 85min, 90min, 95min, 100min, 105min, 110min, 115min, 120min, 125min, 130min, 135min, 140min, 145min, 150min, 155min, 160min, 165min, 170min, 175min, 180min, 185min, 190min, 195min, 200min, 205min, 210min, 215min, 220min, 225min, 230min, 235min, 240min, 245min]
Disease cryptococcosis;
meningitis;
fungal meningitis;
allergic hypersensitivity disease;
cardiac arrest;
interstitial lung disease
Disease ID 12053;
9471;
11608;
1205;
60319;
3082