GSE20813   Details

GSE Accession GSE20813
Title BRE1_Q2539.S2 ChIP-chip
Submission Date 3/11/10
Last Update Date 3/12/13
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Experiment Type Genome binding/occupancy profiling by genome tiling array
Contributor Gary,,Karpen; Sarah Elgin; Andrey Gortchakov; Greg Shanower; Michael Tolstorukov; Peter Kharchenko; Mitzi Kuroda; Vincenzo Pirrotta; Peter Park; Aki Minoda; Nicole Riddle; Yuri Schwartz; Art Alekseyenko; Cameron Kennedy
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Summary modENCODE_submission_923; This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648; Project Goal: We aim to determe the locations of 125 chromosomal proteins and histone modifications across the Drosophila melanogaster genome. The proteins and modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages.; For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf; ; Keywords: CHIP-chip
Overall Design EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Cell Line: S2-DRSC; Tissue: embryo-derived cell-line; Developmental Stage: late embryonic stage; Sex: Male; NUMBER OF REPLICATES: 4; EXPERIMENTAL FACTORS: Cell Line S2-DRSC; Antibody BRE1 Q2539
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